on the new paper: M. R. Winter, M. Morgulis, T. Gildor, Andrew R. Cohen, S. Ben-Tabou de-Leon, Calcium-vesicles perform active diffusion in the sea urchin embryo during larval biomineralization, PLOS Computational Biology, to appear (2021). Also, bioarxiv:: https://doi.org/10.1101/2020.08.14.244053
Author Archives: ac
ERK paper posted to biorxiv
“Spatio-temporal Control of ERK Pulse Frequency Coordinates Fate Decisions during Mammary Acinar Morphogenesis”
very cool work. great job by Pascal Ender, Olivier Pertz and co. Beautiful 3-D movies showing ERK signaling activity in live synthetic breast organoids can be seen here: https://leverjs.net/mcf10a_3d. source code at https://leverjs.net/git.
Human Frontiers Science program grant awarded!
“A spatiotemporal map of signalling processes controlling human stem cell renewal and differentiation”
PERTZ Olivier (SWITZERLAND)
Institute of Cell Biology – University of Bern – Bern – SWITZERLAND
CARAZO SALAS Rafael Edgardo (UK)
School of Cellular and Molecular Medicine – University of Bristol – Bristol – UK
COHEN Andrew (USA)
Dept. of Electrical & Computer Engineering – Drexel University – Philadelphia – USA
Hydra Image Processor paper accepted!
congratulations Eric and Mark!!
Hydra Image Processor: 5-D GPU Image Analysis Library with MATLAB and Python Wrappers. Eric Wait, Mark Winter, and Andrew R. Cohen. Bioinformatics. In press, 2019.
Pixel Rep paper accepted!! congrats Mark, Walt, Eric, Edgar and Angeline
Mark Winter, Walter Mankowski, Eric Wait, Edgar Cardenas De La Hoz, Angeline Aguinaldo and Andrew R. Cohen*, Separating Touching Cells using Pixel Replicated Elliptical Shape Models, IEEE Transactions on Medical Imaging, in press, 2018.
accepted! “A Neuronal Network of Mitochondrial Dynamics Regulates Metastasis”
by M. Cecilia Caino, Jae Ho Seo, Angeline Aguinaldo, Eric Wait, Kelly Bryant, Andrew Kossenkov, James Hayden, Valentina Vaira, Annamaria Morotti, Stefano Ferrero, Silvano Bosari, Dmitry Gabrilovich, Lucia Languino, Andrew Cohen, and Dario Altieri
(to appear) Nature Communications.
Congratulations all!
accepted! ECCV 2016 biomage computing session : “Measuring Process Dynamics and Nuclear Migration for Clones of Neural Progenitor Cells”
Congratulations Edgar and Mark!
Congratulations to Mark, Walt and Eric on the Bioinformatics paper!
LEVER software paper is in press! Look for a new LEVER website, and a new code release, coming soon!
Congratulations to Rohini, Walt and Mark!
Accepted for publication –
R. Joshi, W. Mankowski, M. Winter, J. S. Saini, T. A. Blenkinsop, J. H. Stern, S. Temple* and A. R. Cohen*, Automated measurement of cobblestone morphology for characterizing stem cell-derived retinal pigment epithelial cell cultures, Journal of Ocular Pharmacology and Therapeutics, Special Issue: Cell-based Therapies for Eye Disease. 2016 – In Press.
“A Genome-wide RNAi Screen for Microtubule Bundle Formation and Lysosome Motility Regulation in Drosophila S2 Cells” is in press!
Congratulations to Amber Jolly on the new paper. This work dates back to 2010 – it was a long time coming :)!